CortidQCT Namespace Reference

Name namespace for CortidQCT library. More...

Namespaces
	ColorToLabelMaps
	Namespace containing color to label maps.
	IO
	Namespace for IO helper functions.
	LabelToColorMaps
	Namespace containing label to color maps.

Classes
struct	BarycentricPoint
	BarycentricPoint data type. Represents a points on triangulation in barycentric coordinates. More...
struct	Coordinate3D
struct	DiscreteRange
	Type representing a discrete closed, stridable range. More...
struct	MartrixIOWrapper
	Wrapper for Eigen matrices to support IO. More...
class	MeasurementModel
	Type representing the measurement model. More...
class	Mesh
	A triangle mesh class. More...
class	MeshFitter
class	ModelSampler
struct	Ray
	A basic ray datatype. More...
struct	RayMeshIntersection
class	VolumeSampler
struct	VolumeSize
	Size type for a 3D voxel. More...
struct	VoxelSize
	Size type for a 3D voxel. More...
class	VoxelVolume
	Type representing a voxel volume. More...

Typedefs
using	ColorRGB = std::array< std::uint8_t, 3 >
	24-bit RGB color type
template<class Label , class Scalar >
using	ColorToLabelMap = std::function< Label(Scalar, Scalar, Scalar)>
	Color to label map. More...
using	DiscreteRangef = DiscreteRange< float >
	Alias for float valued ranges.
using	DiscreteRanged = DiscreteRange< double >
	Alias for double valued ranges.
using	DiescreteRangei = DiscreteRange< int >
	Alias for integer value ranges.
template<class Scalar , class Label >
using	LabelToColorMap = std::function< std::array< Scalar, 3 >(Label)>
	Label to color map. More...
using	Rayd = Ray< double >
	Alias for double precision rays.
using	Rayf = Ray< float >
	Lias for single precision rays.

Functions
template<class T >
constexpr DiscreteRange< T >	discreteRange (T min, T max, T stride) noexcept
	Convenient creator function.
template<class T >
constexpr DiscreteRange< T >	discreteRange (T min, T max) noexcept
	Convenient creator function.
template<class MatrixType >
MartrixIOWrapper< MatrixType >	io (Eigen::MatrixBase< MatrixType > &matrix)
template<class MatrixType >
MartrixIOWrapper< MatrixType >	io (Eigen::MatrixBase< MatrixType > const &matrix)
template<class DerivedV , class DerivedN >
Eigen::Matrix< typename DerivedV::Scalar, Eigen::Dynamic, 3 >	samplingPoints (Eigen::MatrixBase< DerivedV > const &V, Eigen::MatrixBase< DerivedN > const &N, MeasurementModel const &model)
	Returns a matrix containing positions to sample a voxel volume at. More...

Detailed Description

Name namespace for CortidQCT library.

Typedef Documentation

template<class Label , class Scalar >

using CortidQCT::ColorToLabelMap = typedef std::function<Label(Scalar, Scalar, Scalar)>

Color to label map.

A function mapping 3-component floating point RGB colors to integer labels. Takes three arguments of type Scalar: red, green, blue, Must return a label of type Label.

Template Parameters

Label	Label type
Scalar	Scalar type of color components

template<class Scalar , class Label >

using CortidQCT::LabelToColorMap = typedef std::function<std::array<Scalar, 3>(Label)>

Label to color map.

A function mapping an integer label to a 3-component floating point RGB color. Takes the label as an argument and returns a std::array<Scalar, 3> RGB color.

Template Parameters

Scalar	Scalar type of color components
Label	Label type

Function Documentation

template<class MatrixType >

MartrixIOWrapper<MatrixType> CortidQCT::io ( Eigen::MatrixBase< MatrixType > &  matrix )

inline

Wrappes an Eigen matrix for IO support

Template Parameters

MatrixType

Eigen matrix type

Parameters

matrix

Eigen matrix

Returns

Wrapper object

template<class MatrixType >

MartrixIOWrapper<MatrixType> CortidQCT::io ( Eigen::MatrixBase< MatrixType > const &  matrix )

inline

Wrappes an Eigen matrix for IO support

Template Parameters

MatrixType

Eigen matrix type

Parameters

matrix

Eigen matrix

Returns

Wrapper object (const)

template<class DerivedV , class DerivedN >

Eigen::Matrix<typename DerivedV::Scalar, Eigen::Dynamic, 3> CortidQCT::samplingPoints	(	Eigen::MatrixBase< DerivedV > const &	V,
		Eigen::MatrixBase< DerivedN > const &	N,
		MeasurementModel const &	model
	)

Returns a matrix containing positions to sample a voxel volume at.

Let and let , where represent model.samplingRange, then the returned NMx3 matrix contains N*M positions, where each M consecutive postitions represent a line through a vertex in V sampled along the surface normal in N.

Parameters

V	Nx3 matrix with vertex positions
N	Nx3 matrix of per-vertex surface normals
model	MeasurementModel instance

Returns

NMx3 matrix containing sampling positions